Figures

Figure 1.1

American White Pelican with locations spanning 5 UTM zones
Figure 1.2

Turkey vulture locations only occurring in one UTM zone
Figure 1.3

How to find coordinates system of GIS layer in ArcCatalog or Table of Contents in ArcMap
Figure 1.4

Study area projected into UTM Zone 12N with original WGS84 underneath
Figure 1.5

Mule deer locations projected into UTM Zone 12N (red) with original locations in WGS84 (black)
Figure 1.6

Overlay of mule deer locations with random locations generated in R
Figure 1.7

Imported raster dataset showing coastline and tributaries
Figure 1.8

Imported Digital Elevation Model using adehabitat package showing coastline and tributaries
Figure 1.9

Buffers around mule deer locations using the a) byid=FALSE (default) and b) byid=TRUE for the gBuffer function using package rgeos
Figure 2.1

Estimating probability of occupancy of Snowshoe hare across the current range in Pennsylvania, 2004
Figure 3.1

Example of a trajectory created using adehabitatLT for a mule deer in Colorado
Figure 3.2

Plot of a First Passage Time for a mule deer in Colorado identifying mean FPT by month
Figure 3.3

Summaries of distance and time (dt) between relocations for mule deer D16
Figure 3.4

Bursts of movements for mule deer D15 after creating segements based for focal use areas
Figure 4.1

Example of KDE with hplug-in smoothing parameter to estimate size of home range for an American White Pelican
Figure 4.2

Example of 95% BBMM home range for a Florida Panther
Figure 4.3

Example of 95% KDE home range with hplug-in for a Florida Panther
Figure 4.4

Example of 95% KDE home range with href for a Florida Panther
Figure 4.5

This figure shows how to summarize size of home range in ArcMap
Figure 4.6

Home range of one panther using BBMM showing all contours
Figure 4.7

Home range using BBMM for panther 110 with various time lags incorporated
Figure 4.8

Locations of one vulture in UTM 17N
Figure 4.9

Imported habitat layer in Albers Equal Area Conic Projection
Figure 4.10

Imported habitat layer projected to UTM Zone 17N similar to vulture locations
Figure 4.11

Overlay of ltraj on spixdf=habitat in UTM Zone 17N
Figure 4.12

Imported raster dataset showing coastline and tributaries
Figure 4.13

Movement paths of two Black Vultures with a similar extent
Figure 4.14

Red identifies ocean and tributaries not used by vultures
Figure 4.15

Contours of home range for 2 black vultures estimated using the Movement-based kernel density method (MKDE)
Figure 4.16

Contours of home range for a mule deer estimated using the dynamic Brownian Bridge Movement Model (dBBMM)
Figure 4.17

Example of CHP home range for 2 Florida panther
Figure 4.18

The LoCoH GUI
Figure 4.19

Example of 95% estimate of home range for a Florida Panther using LoCoH with Fixed K = 1,000
Figure 4.20

Example of 95% estimate of home range for a Florida Panther using LoCoH with Fixed R = 1,000
Figure 4.21

Example of 95% KDE estimate of home range for a Florida Panther using LoCoH with Adaptive = 1,000
Figure 4.22

Example of 95% KDE estimate of home range for a Florida Panther using LoCoH with Adaptive = 10,000
Figure 4.23

Example of 95% estimate of home range for mule deer using Minimum Convex Polygon
Figure 4.24

Example of 95% estimate of home range for mule deer using Minimum Convex Polygon with relocations overlayed
Figure 6.1

Example home range of a mule deer in 3D using KDE with a) href and b) hplug-in bandwidth selection
Figure 6.2

Example of a Digital Elevation Model in 3D using rasterVis package in R
Figure 8.1

Zooming in around mule deer locations using drawExtent in the raster package in R
Figure 8.2

Selection ratios for Florida panther for 6 habitat types (1-6) using Manly’s Selectivity Measure. Habitat type is on x-axis and selectivity measure is on y-axis for a) all panthers and b) each panther
Figure 9.1

Adjacency matrix created in ArcMap using the Adjacency Toolbox
Figure 9.2

Compiling the model structure in WinBUGS
Figure 9.3

Loading the data into WinBUGS
Figure 9.4

Compiling the number of chains in WinBUGS
Figure 9.5

Loading the initial values for each chain in WinBUGS
Figure 9.6

Setting the sample monitor tool and initiating program to run in WinBUGS

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